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    pstpip2 proline-serine-threonine phosphatase interacting protein 2 [ Danio rerio (zebrafish) ]

    Gene ID: 100537857, updated on 27-Mar-2024

    Summary

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    Official Symbol
    pstpip2provided by ZNC
    Official Full Name
    proline-serine-threonine phosphatase interacting protein 2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-091204-90
    See related
    Ensembl:ENSDARG00000089569 AllianceGenome:ZFIN:ZDB-GENE-091204-90
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    si:ch211-251f6.4
    Summary
    Predicted to enable actin binding activity. Predicted to act upstream of or within cell migration and cytoskeleton organization. Orthologous to human PSTPIP2 (proline-serine-threonine phosphatase interacting protein 2). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 10
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 10 NC_007121.7 (8101332..8144017)
    105 previous assembly GRCz10 (GCF_000002035.5) 10 NC_007121.6 (8142819..8184010)

    Chromosome 10 - NC_007121.7Genomic Context describing neighboring genes Neighboring gene zgc:173443 Neighboring gene SUB1 regulator of transcription a Neighboring gene NADH:ubiquinone oxidoreductase subunit A9b Neighboring gene multiciliate differentiation and DNA synthesis associated cell cycle protein Neighboring gene DEAH (Asp-Glu-Ala-His) box polypeptide 29

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    proline-serine-threonine phosphatase-interacting protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007121.7 Reference GRCz11 Primary Assembly

      Range
      8101332..8144017
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009305134.3 → XP_009303409.1  proline-serine-threonine phosphatase-interacting protein 2

      UniProtKB/TrEMBL
      A0A8M3BCU8
      Related
      ENSDARP00000111127.3, ENSDART00000123447.4
      Conserved Domains (2) summary
      pfam16535
      Location:55 → 192
      T3SSipB; Type III cell invasion protein SipB
      cl12013
      Location:15 → 253
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
    Nucleotide Protein Strain
    Heading Accession and Version

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